EasyMultiProfiler
Tutorial
Chapter 1 Introduction
1.1 Installation and update
1.2 Quick start
1.3 basic information
Chapter 2 Import data
2.1 Multi-omics data
2.2 Single-omics data
2.3 Save and load data
2.4 Demo data and script
Chapter 3 Demo data
3.1 Load MAE
3.2 Summary MAE
Chapter 4 Data Extract
4.1 EMP_assay_extract
4.2 EMP_rowdata_extract
4.3 EMP_coldata_extract
Chapter 5 Data Preparation
5.1 EMP_collapse
5.2 EMP_adjust_abudance
5.3 EMP_feature_convert
5.4 EMP_decostand
5.5 EMP_impute
5.6 EMP_identify_assay
5.7 EMP_modify_assay
5.8 EMP_rrarefy
Chapter 6 Data Analysis
6.1 EMP_alpha_analysis
6.2 EMP_cluster_analysis
6.3 EMP_cor_analysis
6.4 EMP_diff_analysis
6.5 EMP_dimension_analysis
6.6 EMP_enrich_analysis
6.7 EMP_marker_analysis
6.8 EMP_GSEA_analysis
6.9 EMP_WGCNA_cluster_analysis
6.10 EMP_WGCNA_cor_analysis
6.11 EMP_multi_analysis
6.12 EMP_nework_analysis
Chapter 7 Data support
7.1 EMP_filter
7.2 EMP_history
7.3 EMP_inject
7.4 EMP_result
7.5 EMP_summary
7.6 EMP_saver_var
7.7 EMP_taxonomy_import
7.8 EMP_function_import
7.9 EMP_normal_import
7.10 EMP_easy_import
7.11 EMP_mutate
Chapter 8 Data Virtualization
8.1 EMP_boxplot
8.2 EMP_scatterplot
8.3 EMP_enrich_dotplot
8.4 EMP_enrich_netplot
8.5 EMP_fitline_plot
8.6 EMP_GSEA_plot
8.7 EMP_heatmap_plot
8.8 EMP_sankey_plot
8.9 EMP_structure_plot
8.10 EMP_volcanol_plot
8.11 EMP_network_plot
8.12 EMP_barplot
Chapter 9 More Useful Tools
9.1 str_detect_multi
9.2 EMP_to_EMP1
9.3 top_detect
9.4 stat_result
Chapter 10 More Examples
10.1 Meta data modified
10.2 Experiment data
10.3 Paired test and intervention cohort
10.4 Full taxonomy annotation
10.5 Installation issues
10.6 Microbiome example
10.7 Trans example
10.8 Metabolite example
Contact
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Chapter 7 Data support
7. 数据辅助 EMP_support:
欢迎阅读本章教程,本教程旨在为用户提供在EasyMultiProfiler数据分析流程中常用的辅助工具和方法。通过本教程,您将学习如何使用多种功能模块进行数据导入、筛选、提取以及查看历史记录等操作。
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